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The RCSB Protein Data Bank (PDB)

http://www.rcsb.org/pdb/

Archive of experimentally-determined, biological macromolecule 3-D structures from the Brookhaven National Laboratory. Also includes newsletters and a description of the PDB file format.

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SDPD-Database

http://www.cristal.org/iniref.html

Structure Determination by Powder Diffraction - Database : methods, tutorials, references and links.

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Powder Diffraction File (PDF)

http://www.icdd.com/

maintained by the International Centre for Diffraction Data (ICDD)

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Peptaibol Database

http://www.cryst.bbk.ac.uk/peptaibol/welcome.html

Aims to provide a fully searchable database for the sequences of peptaibols. It deals primarily with naturally-occurring peptides, generally these have a fungal origin.

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Nucleic Acid Database (NDB)

http://ndbserver.rutgers.edu/

assembles and distributes structural information about nucleic acids.

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Metals Structure Database (CRYSTMET)

http://www.tothcanada.com/

A database of critically evaluated crystallographic data for metals, including alloys, intermetallics and minerals. Contains chemical, crystallographic and bibliographic data together with associated comments regarding experimental details for each study.

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Metalloprotein Database and Browser (MDB)

http://metallo.scripps.edu/

Contains quantitative information on all the metal-containing sites available from structures in the PDB distribution. Includes search and visualization interfaces.

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Inorganic Crystal Structure Database (ICSD)

http://icsd.ill.eu/icsd/

Contains records of all inorganic crystal structures, with atomic coordinates.

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Homologous Structure Alignment Database (HOMSTRAD)

http://tardis.nibio.go.jp/homstrad/

A database of structure-based alignments for homologous protein families. It provides annotated structural alignments in various formats, superimposed structures, links to other databases and the alignment and searching interface to the program FUGUE.

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Heavy Atom Databank (HAD)

http://www.sbg.bio.ic.ac.uk/had/

Information on the preparation and characterisation of heavy-atom derivatives of protein crystals. Also contains information resulting from an analysis of the binding of these heavy-atoms with proteins in the crystal environment.

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Database of Calculated Phase Diagrams of Fe-S Ternary Systems

http://www.aist.go.jp/RIODB/pdsul/e_index.html

Two types of database. One is calculated results for phase diagrams of each ternary system of Fe-Mn-S and Fe-Cr-S systems. Another is a literature database of binary and ternary systems.

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CSDSymmetry

http://www.ccdc.cam.ac.uk/free_services/csdsymmetry/

The most complete collation of observed molecular and crystallographic symmetry properties to date. A relational database built using Microsoft Access.

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Crystallography Open Database (COD)

http://sdpd.univ-lemans.fr/cod/

A project accommodating crystal structure atomic coordinates prior to their publication. It is intended to give faster access to the latest structure determinations, openly.

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Crystal TB

http://www.fqspl.com.pl/?a=product_view&id=41

A database containing information on Protein Crystallization Conditions. It helps researchers in setting conditions for protein crystallization, thus contributing to reducing the time to analyze protein structures.

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Cambridge Structural Database (CSD)

http://www.ccdc.cam.ac.uk/products/csd/

Contains crystal structure information, chemical, and bibliographic data for about 400,000 organic and metal-organic compounds.

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Biological Macromolecule Crystallization Database (BMCD)

http://xpdb.nist.gov:8060/BMCD4/

Contains crystal data and the crystallization conditions, which have been compiled from literature, including proteins, protein:protein complexes, nucleic acid, nucleic acid:nucleic acid complexes, protein:nucleic acid complexes, and viruses.

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